Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AC244093.1-201ENST00000610837 814 ntBASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 RPSAP52-203ENST00000622976 1023 ntBASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AC073592.3-201ENST00000625118 1834 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 WASH4P-201ENST00000564273 1246 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TTTY23B-201ENST00000442790 549 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 AC092506.1-202ENST00000401022 528 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TUBB1P2-201ENST00000422712 1306 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 TUBB1P1-201ENST00000503144 1300 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 PP12613-201ENST00000424958 2230 ntBASIC14.38□□□□□ -0.11
CSMD1Q96PZ7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC109462.3-201ENST00000573934 613 ntBASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 CTBP2P3-201ENST00000585629 1255 ntBASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 LINC00896-202ENST00000609602 2128 ntBASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms