Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 AC092647.4-201ENST00000457211 535 ntBASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 AL671277.2-201ENST00000458060 996 ntBASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 DUX4L17-201ENST00000557360 1267 ntBASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHAMP1Q96JM3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 GUSBP12-201ENST00000513727 720 ntBASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHAMP1Q96JM3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms