Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 ABCD1P5-201ENST00000445663 754 ntBASIC17.65■□□□□ 0.42
IFT43Q96FT9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 AC023511.2-201ENST00000618803 211 ntBASIC17.65■□□□□ 0.42
IFT43Q96FT9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
IFT43Q96FT9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
IFT43Q96FT9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
IFT43Q96FT9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
IFT43Q96FT9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
IFT43Q96FT9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 AC132938.5-201ENST00000624980 1813 ntBASIC17.64■□□□□ 0.41
IFT43Q96FT9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 AP001269.4-201ENST00000609611 512 ntBASIC17.64■□□□□ 0.41
IFT43Q96FT9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
IFT43Q96FT9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IFT43Q96FT9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 PMPCAP1-201ENST00000508114 1576 ntBASIC17.63■□□□□ 0.41
IFT43Q96FT9 AC103702.1-201ENST00000548801 2630 ntBASIC17.63■□□□□ 0.41
IFT43Q96FT9 AC009336.1-201ENST00000608941 1553 ntBASIC17.63■□□□□ 0.41
IFT43Q96FT9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
IFT43Q96FT9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IFT43Q96FT9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms