Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.3■□□□□ 0.84
DDX11Q96FC9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 AC093525.9-201ENST00000624961 1746 ntBASIC20.3■□□□□ 0.84
DDX11Q96FC9 AP002414.3-201ENST00000589352 1468 ntBASIC20.3■□□□□ 0.84
DDX11Q96FC9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 PMPCAP1-201ENST00000508114 1576 ntBASIC20.29■□□□□ 0.84
DDX11Q96FC9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 LAGE3P1-201ENST00000425356 484 ntBASIC20.29■□□□□ 0.84
DDX11Q96FC9 AL591424.1-201ENST00000442569 1213 ntBASIC20.29■□□□□ 0.84
DDX11Q96FC9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 STK25P1-201ENST00000585406 838 ntBASIC20.29■□□□□ 0.84
DDX11Q96FC9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 AL022326.1-202ENST00000641533 845 ntBASIC20.29■□□□□ 0.84
DDX11Q96FC9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX11Q96FC9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX11Q96FC9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 AC132938.5-201ENST00000624980 1813 ntBASIC20.28■□□□□ 0.84
DDX11Q96FC9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 PGAM5P1-201ENST00000518923 814 ntBASIC20.28■□□□□ 0.84
DDX11Q96FC9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 AL353593.2-201ENST00000602529 1483 ntBASIC20.28■□□□□ 0.84
DDX11Q96FC9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX11Q96FC9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX11Q96FC9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX11Q96FC9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX11Q96FC9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
DDX11Q96FC9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDX11Q96FC9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DDX11Q96FC9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX11Q96FC9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms