Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTP4Q96DX8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.39■□□□□ 0.38
RTP4Q96DX8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTP4Q96DX8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTP4Q96DX8 AL356309.3-201ENST00000624132 1934 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTP4Q96DX8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 AP000347.1-202ENST00000435868 847 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 AP002469.2-201ENST00000531724 424 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 AL139424.1-201ENST00000607572 797 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 AL355877.3-201ENST00000622820 899 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 AL139011.1-202ENST00000642063 584 ntBASIC17.39■□□□□ 0.37
RTP4Q96DX8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTP4Q96DX8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTP4Q96DX8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTP4Q96DX8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RTP4Q96DX8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RTP4Q96DX8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.38■□□□□ 0.37
RTP4Q96DX8 AL121912.1-201ENST00000603683 238 ntBASIC17.38■□□□□ 0.37
RTP4Q96DX8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTP4Q96DX8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RTP4Q96DX8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.38■□□□□ 0.37
RTP4Q96DX8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 AC006449.5-201ENST00000610658 2098 ntBASIC17.37■□□□□ 0.37
RTP4Q96DX8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 PAWRP1-201ENST00000451083 565 ntBASIC17.37■□□□□ 0.37
RTP4Q96DX8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 SLC25A6P4-201ENST00000586535 553 ntBASIC17.37■□□□□ 0.37
RTP4Q96DX8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTP4Q96DX8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.37■□□□□ 0.37
RTP4Q96DX8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 AC006538.1-201ENST00000567905 1585 ntBASIC17.36■□□□□ 0.37
RTP4Q96DX8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms