Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 AC023274.1-201ENST00000418278 595 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 MCCD1P2-201ENST00000423228 335 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 AC023511.2-201ENST00000618803 211 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 AC060834.1-201ENST00000443027 2032 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 AC025580.3-201ENST00000617932 1424 ntBASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ECHDC3Q96DC8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 SLC22A20-204ENST00000530038 1673 ntBASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 AL513480.1-201ENST00000451731 511 ntBASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.01■□□□□ 0.31
ECHDC3Q96DC8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 YBX2P1-201ENST00000394192 760 ntBASIC17■□□□□ 0.31
ECHDC3Q96DC8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 MPDU1-223ENST00000582151 728 ntBASIC17■□□□□ 0.31
ECHDC3Q96DC8 MIR4515-201ENST00000584082 81 ntBASIC17■□□□□ 0.31
ECHDC3Q96DC8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 AL645728.2-201ENST00000641974 660 ntBASIC17■□□□□ 0.31
ECHDC3Q96DC8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17■□□□□ 0.31
ECHDC3Q96DC8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ECHDC3Q96DC8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 AL121761.2-201ENST00000598007 1648 ntBASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms