Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 KRT18P27-201ENST00000427733 1299 ntBASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AC027601.4-201ENST00000611259 610 ntBASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AC004706.3-202ENST00000621574 984 ntBASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SH3KBP1Q96B97 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.96■□□□□ 0.3
SH3KBP1Q96B97 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SH3KBP1Q96B97 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.3
SH3KBP1Q96B97 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.96■□□□□ 0.3
SH3KBP1Q96B97 PMS2P7-201ENST00000506558 1336 ntBASIC16.96■□□□□ 0.3
SH3KBP1Q96B97 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 AC009336.1-201ENST00000608941 1553 ntBASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 AP002414.3-201ENST00000589352 1468 ntBASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 AL671883.3-201ENST00000603274 991 ntBASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SH3KBP1Q96B97 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 FLJ16779-201ENST00000612722 7638 ntBASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 UNC93B6-202ENST00000528242 690 ntBASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 AL139327.4-201ENST00000612362 153 ntBASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 FAM197Y3-203ENST00000618346 717 ntBASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 AC023511.2-201ENST00000618803 211 ntBASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms