Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 AL096828.2-201ENST00000567259 1965 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 AL138688.1-201ENST00000624851 1594 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HPS1Q92902 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.71■□□□□ 0.11
HPS1Q92902 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 LINC01311-201ENST00000565162 1445 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 HOXB1-202ENST00000577092 1414 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
HPS1Q92902 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HPS1Q92902 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HPS1Q92902 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HPS1Q92902 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HPS1Q92902 KRT18P48-201ENST00000434763 852 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.71■□□□□ 0.11
HPS1Q92902 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.71■□□□□ 0.11
HPS1Q92902 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
HPS1Q92902 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
HPS1Q92902 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 AL513523.2-202ENST00000427283 2040 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HPS1Q92902 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
HPS1Q92902 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.71■□□□□ 0.1
HPS1Q92902 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HPS1Q92902 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.7■□□□□ 0.1
HPS1Q92902 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HPS1Q92902 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 AC112777.1-201ENST00000540175 1423 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 AL365209.1-201ENST00000624418 6473 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 MTMR9LP-203ENST00000426597 1545 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 KRT18P23-201ENST00000435622 1283 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 KRT126P-201ENST00000549467 1181 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS1Q92902 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.7■□□□□ 0.1
HPS1Q92902 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.7■□□□□ 0.1
HPS1Q92902 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS1Q92902 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HPS1Q92902 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 AL357033.4-201ENST00000617703 1807 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS1Q92902 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HPS1Q92902 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.7■□□□□ 0.1
HPS1Q92902 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS1Q92902 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS1Q92902 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.69■□□□□ 0.1
HPS1Q92902 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS1Q92902 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms