Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX1Q92499 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX1Q92499 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DDX1Q92499 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 DNAJB3-201ENST00000446806 729 ntBASIC18.16■□□□□ 0.5
DDX1Q92499 AC027601.4-201ENST00000611259 610 ntBASIC18.16■□□□□ 0.5
DDX1Q92499 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX1Q92499 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX1Q92499 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX1Q92499 AC124067.4-201ENST00000519691 2379 ntBASIC18.16■□□□□ 0.5
DDX1Q92499 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
DDX1Q92499 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DDX1Q92499 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
DDX1Q92499 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 AC092171.3-201ENST00000610122 2651 ntBASIC18.15■□□□□ 0.5
DDX1Q92499 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 PAWRP1-201ENST00000451083 565 ntBASIC18.15■□□□□ 0.5
DDX1Q92499 SCARNA2-201ENST00000458748 420 ntBASIC18.15■□□□□ 0.5
DDX1Q92499 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.15■□□□□ 0.5
DDX1Q92499 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.15■□□□□ 0.5
DDX1Q92499 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX1Q92499 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.15■□□□□ 0.5
DDX1Q92499 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX1Q92499 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DDX1Q92499 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
DDX1Q92499 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DDX1Q92499 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DDX1Q92499 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX1Q92499 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDX1Q92499 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DDX1Q92499 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DDX1Q92499 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DDX1Q92499 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX1Q92499 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX1Q92499 PCDHA14-201ENST00000506751 2298 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX1Q92499 HTR5BP-201ENST00000430851 1154 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 AL591424.1-201ENST00000442569 1213 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.14■□□□□ 0.49
DDX1Q92499 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX1Q92499 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 FAM197Y3-203ENST00000618346 717 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 AC055717.3-201ENST00000622967 595 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DDX1Q92499 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DDX1Q92499 TUBB8P12-201ENST00000308911 1335 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 TUBB7P-202ENST00000428444 1305 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 TUBB8P7-204ENST00000567960 1332 ntBASIC18.14■□□□□ 0.49
DDX1Q92499 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.14■□□□□ 0.49
DDX1Q92499 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
DDX1Q92499 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX1Q92499 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX1Q92499 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms