Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 UPF3AP3-201ENST00000420996 769 ntBASIC20.04■□□□□ 0.8
STAG1Q8WVM7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 AC002347.1-201ENST00000569543 541 ntBASIC20.04■□□□□ 0.8
STAG1Q8WVM7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 AL121761.2-201ENST00000598007 1648 ntBASIC20.04■□□□□ 0.8
STAG1Q8WVM7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 BCL2-203ENST00000589955 5011 ntBASIC20.03■□□□□ 0.8
STAG1Q8WVM7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 RPSAP43-201ENST00000402237 625 ntBASIC20.03■□□□□ 0.8
STAG1Q8WVM7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 AC005412.3-201ENST00000580309 715 ntBASIC20.03■□□□□ 0.8
STAG1Q8WVM7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.03■□□□□ 0.8
STAG1Q8WVM7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
STAG1Q8WVM7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 DNAJB3-201ENST00000446806 729 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AC112482.1-201ENST00000492080 688 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AC091167.2-201ENST00000579581 588 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 MPDU1-223ENST00000582151 728 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AC010327.4-202ENST00000591484 748 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AL353732.1-201ENST00000569618 1459 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 SLC22A20-204ENST00000530038 1673 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
STAG1Q8WVM7 AC106820.2-201ENST00000563775 3264 ntBASIC20.02■□□□□ 0.8
STAG1Q8WVM7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms