Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 FOSL1P1-201ENST00000511041 816 ntBASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 AC105020.1-201ENST00000435356 2205 ntBASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 AC092068.3-201ENST00000587894 2016 ntBASIC17.83■□□□□ 0.45
TRAF3IP1Q8TDR0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 AC084018.2-201ENST00000613093 2607 ntBASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 HCG4P8-203ENST00000443049 980 ntBASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAF3IP1Q8TDR0 AC097637.2-201ENST00000624096 1997 ntBASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 MIR3652-201ENST00000579335 131 ntBASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 AC099398.1-201ENST00000567919 2776 ntBASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP1Q8TDR0 SIGLEC16-201ENST00000599858 1437 ntBASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms