Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 AP002490.2-201ENST00000524791 560 ntBASIC12.81□□□□□ -0.36
NUP35Q8NFH5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 ME2P1-201ENST00000426028 1970 ntBASIC12.81□□□□□ -0.36
NUP35Q8NFH5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 EGFEM1P-202ENST00000431685 1563 ntBASIC12.81□□□□□ -0.36
NUP35Q8NFH5 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.81□□□□□ -0.36
NUP35Q8NFH5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NUP35Q8NFH5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 RN7SL471P-201ENST00000580476 299 ntBASIC12.8□□□□□ -0.36
NUP35Q8NFH5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 AL645728.1-201ENST00000366221 2101 ntBASIC12.8□□□□□ -0.36
NUP35Q8NFH5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.8□□□□□ -0.36
NUP35Q8NFH5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.79□□□□□ -0.36
NUP35Q8NFH5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms