Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC004461.1-201ENST00000412461 403 ntBASIC26.43■■□□□ 1.82
VPS8Q8N3P4 AC092474.2-201ENST00000424288 719 ntBASIC26.43■■□□□ 1.82
VPS8Q8N3P4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 RN7SL589P-201ENST00000481268 310 ntBASIC26.43■■□□□ 1.82
VPS8Q8N3P4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
VPS8Q8N3P4 AC016027.1-202ENST00000607927 1699 ntBASIC26.43■■□□□ 1.82
VPS8Q8N3P4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC26.42■■□□□ 1.82
VPS8Q8N3P4 AC105020.1-201ENST00000435356 2205 ntBASIC26.42■■□□□ 1.82
VPS8Q8N3P4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 CNN2P11-201ENST00000429351 262 ntBASIC26.41■■□□□ 1.82
VPS8Q8N3P4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 AP002490.2-201ENST00000524791 560 ntBASIC26.41■■□□□ 1.82
VPS8Q8N3P4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 AC093520.2-201ENST00000561830 333 ntBASIC26.41■■□□□ 1.82
VPS8Q8N3P4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 WASH6P-202ENST00000359512 1437 ntBASIC26.41■■□□□ 1.82
VPS8Q8N3P4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 AC078925.2-201ENST00000624013 1973 ntBASIC26.41■■□□□ 1.82
VPS8Q8N3P4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 AKAP8P1-201ENST00000434743 1349 ntBASIC26.41■■□□□ 1.82
VPS8Q8N3P4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS8Q8N3P4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 AC026120.1-201ENST00000611536 926 ntBASIC26.4■■□□□ 1.82
VPS8Q8N3P4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC26.4■■□□□ 1.82
VPS8Q8N3P4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms