Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AC005052.1-201ENST00000625181 2492 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AL021920.2-201ENST00000624828 1351 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AL662844.4-201ENST00000606367 2838 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC006538.1-201ENST00000567905 1585 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 LINC02199-201ENST00000506655 2702 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 KLF4P1-201ENST00000412782 1185 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC113347.1-201ENST00000413321 391 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AL137013.1-201ENST00000432946 1228 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC139887.4-201ENST00000607877 719 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AL139011.1-202ENST00000642063 584 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 MTHFR-217ENST00000641820 1569 ntBASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01561Q8N1V8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 LINC00895-201ENST00000629028 1637 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 AC087499.1-201ENST00000418141 1075 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ACTG1P4-201ENST00000425123 1122 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 AC112907.2-201ENST00000448639 330 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 RNF126P1-202ENST00000569893 925 ntBASIC11.49□□□□□ -0.57
LINC01561Q8N1V8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms