Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 AC244107.1-201ENST00000442033 332 ntBASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 AC097493.3-201ENST00000509725 367 ntBASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 GNAS-203ENST00000306120 1878 ntBASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 AC093525.9-201ENST00000624961 1746 ntBASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 SLC25A1P3-201ENST00000395415 828 ntBASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 AC008761.3-201ENST00000624803 892 ntBASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPAS4Q8IUM7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 LINC02560-201ENST00000596379 459 ntBASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 AL035252.4-201ENST00000624174 288 ntBASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPAS4Q8IUM7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms