Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 AL359075.1-203ENST00000462729 1002 ntBASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 AP002490.2-201ENST00000524791 560 ntBASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 ALOX12P2-203ENST00000570921 1945 ntBASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 Z83836.1-201ENST00000624605 1642 ntBASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 AC103702.1-201ENST00000548801 2630 ntBASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 VENTXP5-201ENST00000523979 775 ntBASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AL353593.2-201ENST00000602529 1483 ntBASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRTM1Q86UE6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 AC009336.1-201ENST00000608941 1553 ntBASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 AL138831.2-201ENST00000606564 490 ntBASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 TUBB8P12-201ENST00000308911 1335 ntBASIC14.85□□□□□ -0.03
LRRTM1Q86UE6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms