Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.25■□□□□ 0.99
RGPD4Q7Z3J3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 RNA5SP423-201ENST00000517127 109 ntBASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.24■□□□□ 0.99
RGPD4Q7Z3J3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 BRWD1P1-201ENST00000401091 371 ntBASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 FAM21FP-201ENST00000426241 1131 ntBASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 CSF2RBP1-201ENST00000447905 391 ntBASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RGPD4Q7Z3J3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms