Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 AC011558.1-201ENST00000623459 338 ntBASIC14.98□□□□□ -0.01
C11orf88Q6PI97 AC103702.1-201ENST00000548801 2630 ntBASIC14.98□□□□□ -0.01
C11orf88Q6PI97 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 PCDHB17P-201ENST00000539533 2393 ntBASIC14.98□□□□□ -0.01
C11orf88Q6PI97 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.98□□□□□ -0.01
C11orf88Q6PI97 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AL031133.1-201ENST00000406807 723 ntBASIC14.97□□□□□ -0.01
C11orf88Q6PI97 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AC116407.2-201ENST00000613639 860 ntBASIC14.97□□□□□ -0.01
C11orf88Q6PI97 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 AC138969.2-201ENST00000532739 9932 ntBASIC14.97□□□□□ -0.01
C11orf88Q6PI97 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C11orf88Q6PI97 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 OR2I1P-209ENST00000641730 5365 ntBASIC14.96□□□□□ -0.01
C11orf88Q6PI97 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 UPK3BP1-201ENST00000428678 509 ntBASIC14.96□□□□□ -0.01
C11orf88Q6PI97 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 SDHAP2-201ENST00000455183 2001 ntBASIC14.96□□□□□ -0.01
C11orf88Q6PI97 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 AC132872.4-202ENST00000622924 2756 ntBASIC14.96□□□□□ -0.01
C11orf88Q6PI97 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C11orf88Q6PI97 GPAT2P1-201ENST00000444924 1672 ntBASIC14.96□□□□□ -0.01
C11orf88Q6PI97 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms