Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KRT18P58-201ENST00000527480 1120 ntBASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 PGM5P2-202ENST00000637225 1043 ntBASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 AL590787.1-201ENST00000568856 1315 ntBASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 PMS2P1-201ENST00000431037 1228 ntBASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 GPR89P-201ENST00000407924 1495 ntBASIC17.82■□□□□ 0.44
RFWD3Q6PCD5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 AL023806.1-201ENST00000603994 1649 ntBASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 AC007967.2-201ENST00000432613 625 ntBASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 AC108073.2-201ENST00000464002 357 ntBASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 AC140113.2-201ENST00000604370 208 ntBASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.81■□□□□ 0.44
RFWD3Q6PCD5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms