Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 KRT18P31-201ENST00000506277 1292 ntBASIC15.58■□□□□ 0.08
NIPAL3Q6P499 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 AL732292.2-201ENST00000609649 430 ntBASIC15.58■□□□□ 0.08
NIPAL3Q6P499 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.58■□□□□ 0.08
NIPAL3Q6P499 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 LINC01711-201ENST00000598340 967 ntBASIC15.57■□□□□ 0.08
NIPAL3Q6P499 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NIPAL3Q6P499 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 AC092068.3-201ENST00000587894 2016 ntBASIC15.56■□□□□ 0.08
NIPAL3Q6P499 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 PCDH8P1-201ENST00000428983 2773 ntBASIC15.56■□□□□ 0.08
NIPAL3Q6P499 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 TSPY19P-201ENST00000418461 509 ntBASIC15.56■□□□□ 0.08
NIPAL3Q6P499 TSPY18P-201ENST00000441642 509 ntBASIC15.56■□□□□ 0.08
NIPAL3Q6P499 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.56■□□□□ 0.08
NIPAL3Q6P499 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 AC073592.5-201ENST00000624854 528 ntBASIC15.56■□□□□ 0.08
NIPAL3Q6P499 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.56■□□□□ 0.08
NIPAL3Q6P499 AL353593.2-201ENST00000602529 1483 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms