Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 AL023806.1-201ENST00000603994 1649 ntBASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 AL160237.2-201ENST00000556165 472 ntBASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NIPAL1Q6NVV3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 AL589182.2-201ENST00000619332 1049 ntBASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL1Q6NVV3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL1Q6NVV3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 NKAPP1-205ENST00000585790 367 ntBASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.51■□□□□ 0.23
NIPAL1Q6NVV3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms