Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 AC103564.2-201ENST00000432853 1299 ntBASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 MIR4497-201ENST00000583208 89 ntBASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 STK25P1-201ENST00000585406 838 ntBASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 AC005332.3-201ENST00000589904 676 ntBASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 AP006294.2-201ENST00000641667 209 ntBASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.71□□□□□ -0.53
LINC00242Q5T6M2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 AL135999.2-201ENST00000622438 1686 ntBASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 AL596257.1-201ENST00000641463 2694 ntBASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00242Q5T6M2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TUBB8P12-201ENST00000308911 1335 ntBASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TUBB7P-202ENST00000428444 1305 ntBASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TUBB8P7-204ENST00000567960 1332 ntBASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms