Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AC004870.1-201ENST00000315132 882 ntBASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 KRT18P67-201ENST00000432816 1264 ntBASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AC006557.2-201ENST00000592985 1240 ntBASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PCDHA14-201ENST00000506751 2298 ntBASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CBWD3Q5JTY5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 AP002469.2-201ENST00000531724 424 ntBASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 AL805961.1-202ENST00000641562 540 ntBASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 TUBB8P12-201ENST00000308911 1335 ntBASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 TUBB7P-202ENST00000428444 1305 ntBASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 TUBB8P7-204ENST00000567960 1332 ntBASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CBWD3Q5JTY5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 AC008735.5-201ENST00000623544 497 ntBASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CBWD3Q5JTY5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms