Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 AC002310.6-201ENST00000624451 1377 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 SLC25A6P2-201ENST00000497974 877 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 MIR1199-201ENST00000621445 119 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 AC117500.6-201ENST00000624871 588 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 AF228730.7-201ENST00000641842 219 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 TUBB7P-202ENST00000428444 1305 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN20Q4JDL3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 OR6D1P-202ENST00000641007 5290 ntBASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 RPS2P28-201ENST00000314255 741 ntBASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 AL645728.1-201ENST00000366221 2101 ntBASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 IGHV3-65-201ENST00000523210 341 ntBASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 AC008667.4-201ENST00000607370 168 ntBASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN20Q4JDL3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 AC092910.1-201ENST00000482027 1129 ntBASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms