Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL1Q00532 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL1Q00532 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL1Q00532 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL1Q00532 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 AC106795.1-205ENST00000512851 1056 ntBASIC16.84■□□□□ 0.29
CDKL1Q00532 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL1Q00532 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL1Q00532 MIR3652-201ENST00000579335 131 ntBASIC16.84■□□□□ 0.29
CDKL1Q00532 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKL1Q00532 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDKL1Q00532 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL1Q00532 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.83■□□□□ 0.29
CDKL1Q00532 OR6D1P-202ENST00000641007 5290 ntBASIC16.83■□□□□ 0.29
CDKL1Q00532 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKL1Q00532 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKL1Q00532 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDKL1Q00532 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDKL1Q00532 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 HCG4P8-203ENST00000443049 980 ntBASIC16.83■□□□□ 0.28
CDKL1Q00532 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 PRYP5-201ENST00000451909 266 ntBASIC16.83■□□□□ 0.28
CDKL1Q00532 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CDKL1Q00532 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKL1Q00532 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDKL1Q00532 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.83■□□□□ 0.28
CDKL1Q00532 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKL1Q00532 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDKL1Q00532 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.83■□□□□ 0.28
CDKL1Q00532 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.83■□□□□ 0.28
CDKL1Q00532 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL1Q00532 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 AC060834.1-201ENST00000443027 2032 ntBASIC16.82■□□□□ 0.28
CDKL1Q00532 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CDKL1Q00532 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 RBM17P3-201ENST00000417687 1192 ntBASIC16.82■□□□□ 0.28
CDKL1Q00532 AC132008.2-207ENST00000454517 770 ntBASIC16.82■□□□□ 0.28
CDKL1Q00532 FOSL1P1-201ENST00000511041 816 ntBASIC16.82■□□□□ 0.28
CDKL1Q00532 AP001269.4-201ENST00000609611 512 ntBASIC16.82■□□□□ 0.28
CDKL1Q00532 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL1Q00532 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKL1Q00532 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL1Q00532 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms