Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 PAWRP1-201ENST00000451083 565 ntBASIC16.18■□□□□ 0.18
RAE1P78406 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 UNC93B7-201ENST00000509439 705 ntBASIC16.18■□□□□ 0.18
RAE1P78406 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.18■□□□□ 0.18
RAE1P78406 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 LINC00895-201ENST00000629028 1637 ntBASIC16.18■□□□□ 0.18
RAE1P78406 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
RAE1P78406 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
RAE1P78406 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
RAE1P78406 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.17■□□□□ 0.18
RAE1P78406 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.17■□□□□ 0.18
RAE1P78406 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.17■□□□□ 0.18
RAE1P78406 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.17■□□□□ 0.18
RAE1P78406 IFNL4P1-201ENST00000607083 540 ntBASIC16.17■□□□□ 0.18
RAE1P78406 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.17■□□□□ 0.18
RAE1P78406 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.17■□□□□ 0.18
RAE1P78406 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAE1P78406 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.17■□□□□ 0.18
RAE1P78406 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAE1P78406 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
RAE1P78406 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAE1P78406 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAE1P78406 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 PTCHD3P3-201ENST00000403073 906 ntBASIC16.16■□□□□ 0.18
RAE1P78406 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.16■□□□□ 0.18
RAE1P78406 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.16■□□□□ 0.18
RAE1P78406 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.16■□□□□ 0.18
RAE1P78406 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 AC006504.4-201ENST00000592118 1568 ntBASIC16.16■□□□□ 0.18
RAE1P78406 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAE1P78406 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAE1P78406 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RAE1P78406 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAE1P78406 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.15■□□□□ 0.18
RAE1P78406 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.15■□□□□ 0.18
RAE1P78406 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAE1P78406 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAE1P78406 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAE1P78406 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.15■□□□□ 0.18
RAE1P78406 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms