Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.04■□□□□ -0
UBE2NP61088 AC093525.9-201ENST00000624961 1746 ntBASIC15.04■□□□□ -0
UBE2NP61088 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UBE2NP61088 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
UBE2NP61088 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 ZNF259P1-201ENST00000407656 1365 ntBASIC15.04■□□□□ -0
UBE2NP61088 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 AP002414.1-201ENST00000391405 1147 ntBASIC15.04■□□□□ -0
UBE2NP61088 AC073621.1-201ENST00000392730 636 ntBASIC15.04■□□□□ -0
UBE2NP61088 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.04■□□□□ -0
UBE2NP61088 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.04■□□□□ -0
UBE2NP61088 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 GGTLC5P-201ENST00000617623 998 ntBASIC15.04■□□□□ -0
UBE2NP61088 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.04■□□□□ -0
UBE2NP61088 AC117500.6-201ENST00000624871 588 ntBASIC15.04■□□□□ -0
UBE2NP61088 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.04■□□□□ -0
UBE2NP61088 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.04■□□□□ -0
UBE2NP61088 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBE2NP61088 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBE2NP61088 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.03■□□□□ -0
UBE2NP61088 PI4KAP1-204ENST00000612579 1703 ntBASIC15.03■□□□□ -0
UBE2NP61088 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.03■□□□□ -0
UBE2NP61088 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 AL590787.1-201ENST00000568856 1315 ntBASIC15.03■□□□□ -0
UBE2NP61088 AL022342.1-201ENST00000400363 863 ntBASIC15.03■□□□□ -0
UBE2NP61088 PTCHD3P3-201ENST00000403073 906 ntBASIC15.03■□□□□ -0
UBE2NP61088 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBE2NP61088 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.03■□□□□ -0
UBE2NP61088 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.03■□□□□ -0
UBE2NP61088 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.03■□□□□ -0
UBE2NP61088 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.03■□□□□ -0
UBE2NP61088 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UBE2NP61088 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBE2NP61088 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2NP61088 AL023806.1-201ENST00000603994 1649 ntBASIC15.03■□□□□ -0
UBE2NP61088 PRORSD1P-202ENST00000563365 2154 ntBASIC15.02■□□□□ -0
UBE2NP61088 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2NP61088 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2NP61088 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2NP61088 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.02■□□□□ -0
UBE2NP61088 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.02■□□□□ -0
UBE2NP61088 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2NP61088 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2NP61088 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2NP61088 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.02■□□□□ -0
UBE2NP61088 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.02■□□□□ -0
UBE2NP61088 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.02■□□□□ -0
UBE2NP61088 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.02■□□□□ -0
UBE2NP61088 RPL13AP23-201ENST00000480739 586 ntBASIC15.02■□□□□ -0
UBE2NP61088 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.02■□□□□ -0
UBE2NP61088 RNA5SP415-201ENST00000517246 115 ntBASIC15.02■□□□□ -0
UBE2NP61088 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.02■□□□□ -0
UBE2NP61088 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms