Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FLJ13224-201ENST00000313737 1514 ntBASIC19■□□□□ 0.63
LBX1P52954 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
LBX1P52954 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LBX1P52954 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LBX1P52954 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.99■□□□□ 0.63
LBX1P52954 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.99■□□□□ 0.63
LBX1P52954 TMEM198B-204ENST00000484016 896 ntBASIC18.99■□□□□ 0.63
LBX1P52954 RNA5SP410-201ENST00000516285 106 ntBASIC18.99■□□□□ 0.63
LBX1P52954 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.99■□□□□ 0.63
LBX1P52954 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.99■□□□□ 0.63
LBX1P52954 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.99■□□□□ 0.63
LBX1P52954 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.99■□□□□ 0.63
LBX1P52954 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.99■□□□□ 0.63
LBX1P52954 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.99■□□□□ 0.63
LBX1P52954 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.99■□□□□ 0.63
LBX1P52954 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LBX1P52954 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.99■□□□□ 0.63
LBX1P52954 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LBX1P52954 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 AC093484.2-201ENST00000580996 2166 ntBASIC18.99■□□□□ 0.63
LBX1P52954 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LBX1P52954 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.99■□□□□ 0.63
LBX1P52954 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LBX1P52954 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LBX1P52954 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LBX1P52954 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.98■□□□□ 0.63
LBX1P52954 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 KRT8P19-201ENST00000551916 1455 ntBASIC18.98■□□□□ 0.63
LBX1P52954 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LBX1P52954 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.98■□□□□ 0.63
LBX1P52954 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.98■□□□□ 0.63
LBX1P52954 TDH-203ENST00000531764 1110 ntBASIC18.98■□□□□ 0.63
LBX1P52954 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.98■□□□□ 0.63
LBX1P52954 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.98■□□□□ 0.63
LBX1P52954 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.98■□□□□ 0.63
LBX1P52954 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LBX1P52954 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
LBX1P52954 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.98■□□□□ 0.63
LBX1P52954 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.98■□□□□ 0.63
LBX1P52954 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LBX1P52954 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.98■□□□□ 0.63
LBX1P52954 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LBX1P52954 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LBX1P52954 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.97■□□□□ 0.63
LBX1P52954 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.97■□□□□ 0.63
LBX1P52954 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.97■□□□□ 0.63
LBX1P52954 MIR5189-201ENST00000577370 114 ntBASIC18.97■□□□□ 0.63
LBX1P52954 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.97■□□□□ 0.63
LBX1P52954 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.97■□□□□ 0.63
LBX1P52954 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LBX1P52954 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 NOC2LP1-202ENST00000452600 2235 ntBASIC18.97■□□□□ 0.63
LBX1P52954 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LBX1P52954 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.97■□□□□ 0.63
LBX1P52954 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LBX1P52954 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.96■□□□□ 0.63
LBX1P52954 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LBX1P52954 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
LBX1P52954 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.96■□□□□ 0.63
LBX1P52954 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LBX1P52954 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LBX1P52954 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.96■□□□□ 0.63
LBX1P52954 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms