Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGA2P52926 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGA2P52926 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
HMGA2P52926 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGA2P52926 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.58■□□□□ 0.09
HMGA2P52926 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.58■□□□□ 0.09
HMGA2P52926 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
HMGA2P52926 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 AC105917.1-201ENST00000506637 2539 ntBASIC15.58■□□□□ 0.09
HMGA2P52926 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HMGA2P52926 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HMGA2P52926 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.58■□□□□ 0.08
HMGA2P52926 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGA2P52926 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 AC091607.1-201ENST00000490318 1060 ntBASIC15.58■□□□□ 0.08
HMGA2P52926 AC093827.2-201ENST00000512654 315 ntBASIC15.58■□□□□ 0.08
HMGA2P52926 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.58■□□□□ 0.08
HMGA2P52926 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.58■□□□□ 0.08
HMGA2P52926 AL136038.3-201ENST00000561909 1096 ntBASIC15.58■□□□□ 0.08
HMGA2P52926 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGA2P52926 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.58■□□□□ 0.08
HMGA2P52926 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HMGA2P52926 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 INTS4P1-201ENST00000438455 1935 ntBASIC15.58■□□□□ 0.08
HMGA2P52926 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
HMGA2P52926 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
HMGA2P52926 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGA2P52926 TP73-AS1-210ENST00000637775 1455 ntBASIC15.58■□□□□ 0.08
HMGA2P52926 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGA2P52926 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HMGA2P52926 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA2P52926 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGA2P52926 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA2P52926 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGA2P52926 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGA2P52926 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGA2P52926 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.57■□□□□ 0.08
HMGA2P52926 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HMGA2P52926 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HMGA2P52926 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 KRT8P49-201ENST00000604166 1432 ntBASIC15.57■□□□□ 0.08
HMGA2P52926 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA2P52926 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 AC006277.1-201ENST00000624348 1610 ntBASIC15.57■□□□□ 0.08
HMGA2P52926 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.57■□□□□ 0.08
HMGA2P52926 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA2P52926 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms