Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
GTF2A1P52655 AC116353.5-201ENST00000638148 1699 ntBASIC16.79■□□□□ 0.28
GTF2A1P52655 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.79■□□□□ 0.28
GTF2A1P52655 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.79■□□□□ 0.28
GTF2A1P52655 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.79■□□□□ 0.28
GTF2A1P52655 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.79■□□□□ 0.28
GTF2A1P52655 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.79■□□□□ 0.28
GTF2A1P52655 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
GTF2A1P52655 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GTF2A1P52655 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GTF2A1P52655 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GTF2A1P52655 AC041040.2-201ENST00000622926 2899 ntBASIC16.79■□□□□ 0.28
GTF2A1P52655 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.78■□□□□ 0.28
GTF2A1P52655 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.78■□□□□ 0.28
GTF2A1P52655 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 AP003680.1-201ENST00000598970 3660 ntBASIC16.78■□□□□ 0.28
GTF2A1P52655 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.78■□□□□ 0.28
GTF2A1P52655 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.78■□□□□ 0.28
GTF2A1P52655 MTMR9LP-203ENST00000426597 1545 ntBASIC16.78■□□□□ 0.28
GTF2A1P52655 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GTF2A1P52655 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.78■□□□□ 0.28
GTF2A1P52655 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GTF2A1P52655 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GTF2A1P52655 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.78■□□□□ 0.28
GTF2A1P52655 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GTF2A1P52655 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
GTF2A1P52655 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.77■□□□□ 0.28
GTF2A1P52655 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GTF2A1P52655 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.77■□□□□ 0.28
GTF2A1P52655 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.77■□□□□ 0.28
GTF2A1P52655 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
GTF2A1P52655 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1P52655 KRT18P16-201ENST00000510337 1294 ntBASIC16.77■□□□□ 0.28
GTF2A1P52655 AF201337.1-201ENST00000520239 748 ntBASIC16.77■□□□□ 0.28
GTF2A1P52655 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.77■□□□□ 0.28
GTF2A1P52655 AL050303.2-201ENST00000619798 666 ntBASIC16.77■□□□□ 0.28
GTF2A1P52655 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.77■□□□□ 0.28
GTF2A1P52655 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GTF2A1P52655 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
GTF2A1P52655 REXO1L2P-201ENST00000425429 2069 ntBASIC16.77■□□□□ 0.27
GTF2A1P52655 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.77■□□□□ 0.27
GTF2A1P52655 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.77■□□□□ 0.27
GTF2A1P52655 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GTF2A1P52655 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GTF2A1P52655 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
GTF2A1P52655 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.77■□□□□ 0.27
GTF2A1P52655 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1P52655 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GTF2A1P52655 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms