Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6CP51160 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6CP51160 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6CP51160 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PDE6CP51160 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6CP51160 IL9RP2-201ENST00000423948 1312 ntBASIC18.49■□□□□ 0.55
PDE6CP51160 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PDE6CP51160 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE6CP51160 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDE6CP51160 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDE6CP51160 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.48■□□□□ 0.55
PDE6CP51160 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PDE6CP51160 AP000347.1-202ENST00000435868 847 ntBASIC18.48■□□□□ 0.55
PDE6CP51160 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.48■□□□□ 0.55
PDE6CP51160 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.48■□□□□ 0.55
PDE6CP51160 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.48■□□□□ 0.55
PDE6CP51160 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.48■□□□□ 0.55
PDE6CP51160 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDE6CP51160 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6CP51160 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 AC092053.1-201ENST00000605787 1936 ntBASIC18.47■□□□□ 0.55
PDE6CP51160 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDE6CP51160 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 SPDYE21P-201ENST00000413323 827 ntBASIC18.47■□□□□ 0.55
PDE6CP51160 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6CP51160 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6CP51160 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6CP51160 AC021087.4-201ENST00000563761 564 ntBASIC18.47■□□□□ 0.55
PDE6CP51160 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PDE6CP51160 AC148477.8-201ENST00000624298 468 ntBASIC18.47■□□□□ 0.55
PDE6CP51160 FAM215A-202ENST00000632077 792 ntBASIC18.47■□□□□ 0.55
PDE6CP51160 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6CP51160 AC148477.5-201ENST00000625164 1645 ntBASIC18.47■□□□□ 0.55
PDE6CP51160 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6CP51160 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PDE6CP51160 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6CP51160 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6CP51160 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6CP51160 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
PDE6CP51160 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
PDE6CP51160 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDE6CP51160 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDE6CP51160 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 PMS2P1-201ENST00000431037 1228 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms