Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.31■□□□□ 0.36
HADHAP40939 ACTG1P4-201ENST00000425123 1122 ntBASIC17.31■□□□□ 0.36
HADHAP40939 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 SAPCD2P3-201ENST00000455031 850 ntBASIC17.31■□□□□ 0.36
HADHAP40939 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HADHAP40939 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.31■□□□□ 0.36
HADHAP40939 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 AC012313.10-201ENST00000623509 926 ntBASIC17.31■□□□□ 0.36
HADHAP40939 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.3■□□□□ 0.36
HADHAP40939 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HADHAP40939 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HADHAP40939 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 SCARNA2-201ENST00000458748 420 ntBASIC17.3■□□□□ 0.36
HADHAP40939 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.3■□□□□ 0.36
HADHAP40939 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.3■□□□□ 0.36
HADHAP40939 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.3■□□□□ 0.36
HADHAP40939 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.3■□□□□ 0.36
HADHAP40939 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.3■□□□□ 0.36
HADHAP40939 AC008608.2-201ENST00000606089 416 ntBASIC17.3■□□□□ 0.36
HADHAP40939 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.3■□□□□ 0.36
HADHAP40939 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HADHAP40939 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HADHAP40939 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHAP40939 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HADHAP40939 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HADHAP40939 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.29■□□□□ 0.36
HADHAP40939 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HADHAP40939 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHAP40939 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.29■□□□□ 0.36
HADHAP40939 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.29■□□□□ 0.36
HADHAP40939 IFNL4P1-201ENST00000607083 540 ntBASIC17.29■□□□□ 0.36
HADHAP40939 AL022326.1-202ENST00000641533 845 ntBASIC17.29■□□□□ 0.36
HADHAP40939 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHAP40939 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
HADHAP40939 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HADHAP40939 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHAP40939 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHAP40939 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms