Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 AL441883.1-201ENST00000566170 1045 ntBASIC19.47■□□□□ 0.71
CLCN1P35523 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.47■□□□□ 0.71
CLCN1P35523 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 AC005363.2-201ENST00000618631 242 ntBASIC19.47■□□□□ 0.71
CLCN1P35523 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLCN1P35523 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.47■□□□□ 0.71
CLCN1P35523 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 AC013268.4-201ENST00000637413 2228 ntBASIC19.47■□□□□ 0.71
CLCN1P35523 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 OR6D1P-203ENST00000641209 4860 ntBASIC19.46■□□□□ 0.71
CLCN1P35523 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.46■□□□□ 0.71
CLCN1P35523 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLCN1P35523 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLCN1P35523 PVRIG2P-201ENST00000435460 978 ntBASIC19.46■□□□□ 0.71
CLCN1P35523 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLCN1P35523 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CLCN1P35523 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.46■□□□□ 0.71
CLCN1P35523 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN1P35523 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN1P35523 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLCN1P35523 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLCN1P35523 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 AC005521.1-201ENST00000393351 872 ntBASIC19.45■□□□□ 0.7
CLCN1P35523 AL137013.1-201ENST00000432946 1228 ntBASIC19.45■□□□□ 0.7
CLCN1P35523 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 ATP5G1P1-201ENST00000448724 379 ntBASIC19.45■□□□□ 0.7
CLCN1P35523 COX11P1-201ENST00000489116 835 ntBASIC19.45■□□□□ 0.7
CLCN1P35523 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN1P35523 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.45■□□□□ 0.7
CLCN1P35523 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CLCN1P35523 AC011558.1-201ENST00000623459 338 ntBASIC19.45■□□□□ 0.7
CLCN1P35523 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN1P35523 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 REXO1L11P-201ENST00000620964 1927 ntBASIC19.45■□□□□ 0.7
CLCN1P35523 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN1P35523 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLCN1P35523 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms