Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN7P35236 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN7P35236 HLA-J-202ENST00000469281 1241 ntBASIC17.66■□□□□ 0.42
PTPN7P35236 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PTPN7P35236 KRT18P35-201ENST00000510488 1269 ntBASIC17.66■□□□□ 0.42
PTPN7P35236 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN7P35236 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN7P35236 AL391256.1-201ENST00000443260 1855 ntBASIC17.66■□□□□ 0.42
PTPN7P35236 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN7P35236 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN7P35236 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN7P35236 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN7P35236 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN7P35236 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN7P35236 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN7P35236 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN7P35236 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PTPN7P35236 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN7P35236 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN7P35236 AC243591.1-201ENST00000452967 1364 ntBASIC17.65■□□□□ 0.42
PTPN7P35236 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN7P35236 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN7P35236 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPN7P35236 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN7P35236 UBALD1-205ENST00000590891 2641 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN7P35236 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 RBM17P3-201ENST00000417687 1192 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 AC132008.2-207ENST00000454517 770 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
PTPN7P35236 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 AC013467.2-201ENST00000605472 835 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 AL139288.1-201ENST00000623748 933 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 AL022326.1-202ENST00000641533 845 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 AL139011.1-202ENST00000642063 584 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN7P35236 NCF1C-201ENST00000438382 1427 ntBASIC17.64■□□□□ 0.41
PTPN7P35236 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN7P35236 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN7P35236 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN7P35236 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 OR6D1P-203ENST00000641209 4860 ntBASIC17.63■□□□□ 0.41
PTPN7P35236 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPN7P35236 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPN7P35236 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN7P35236 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms