Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.77■■□□□ 1.4
CPS1P31327 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CPS1P31327 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 BOLA2P3-201ENST00000404566 256 ntBASIC23.77■■□□□ 1.4
CPS1P31327 RPL37AP1-201ENST00000412502 279 ntBASIC23.77■■□□□ 1.4
CPS1P31327 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC23.77■■□□□ 1.4
CPS1P31327 RASL12-203ENST00000434605 982 ntTSL 2 BASIC23.77■■□□□ 1.4
CPS1P31327 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 TPI1-206ENST00000488464 791 ntTSL 5 BASIC23.77■■□□□ 1.4
CPS1P31327 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC23.77■■□□□ 1.4
CPS1P31327 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC23.77■■□□□ 1.4
CPS1P31327 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CPS1P31327 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.77■■□□□ 1.4
CPS1P31327 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.77■■□□□ 1.4
CPS1P31327 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.77■■□□□ 1.4
CPS1P31327 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.76■■□□□ 1.39
CPS1P31327 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPS1P31327 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPS1P31327 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CPS1P31327 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC23.76■■□□□ 1.39
CPS1P31327 MIR1908-201ENST00000410394 80 ntBASIC23.76■■□□□ 1.39
CPS1P31327 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC23.76■■□□□ 1.39
CPS1P31327 ARL16-210ENST00000574938 751 ntTSL 2 BASIC23.76■■□□□ 1.39
CPS1P31327 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC23.76■■□□□ 1.39
CPS1P31327 AC073389.1-201ENST00000595595 795 ntBASIC23.76■■□□□ 1.39
CPS1P31327 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CPS1P31327 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPS1P31327 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPS1P31327 AC009113.1-201ENST00000570267 2443 ntBASIC23.76■■□□□ 1.39
CPS1P31327 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPS1P31327 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.76■■□□□ 1.39
CPS1P31327 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC23.76■■□□□ 1.39
CPS1P31327 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CPS1P31327 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.76■■□□□ 1.39
CPS1P31327 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.75■■□□□ 1.39
CPS1P31327 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC23.75■■□□□ 1.39
CPS1P31327 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC23.75■■□□□ 1.39
CPS1P31327 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.75■■□□□ 1.39
CPS1P31327 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC23.75■■□□□ 1.39
CPS1P31327 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CPS1P31327 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPS1P31327 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC23.75■■□□□ 1.39
CPS1P31327 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPS1P31327 SPDYE19P-201ENST00000338590 713 ntBASIC23.74■■□□□ 1.39
CPS1P31327 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPS1P31327 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC23.74■■□□□ 1.39
CPS1P31327 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.74■■□□□ 1.39
CPS1P31327 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC23.74■■□□□ 1.39
CPS1P31327 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC23.74■■□□□ 1.39
CPS1P31327 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPS1P31327 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPS1P31327 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPS1P31327 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPS1P31327 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.74■■□□□ 1.39
CPS1P31327 AC007389.4-201ENST00000454674 793 ntBASIC23.74■■□□□ 1.39
CPS1P31327 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 AC099548.2-209ENST00000480264 625 ntBASIC23.74■■□□□ 1.39
CPS1P31327 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC23.74■■□□□ 1.39
CPS1P31327 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
CPS1P31327 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC23.74■■□□□ 1.39
CPS1P31327 AL138918.1-201ENST00000568306 659 ntBASIC23.74■■□□□ 1.39
CPS1P31327 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.74■■□□□ 1.39
CPS1P31327 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CPS1P31327 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
CPS1P31327 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC23.73■■□□□ 1.39
CPS1P31327 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 AL353705.2-201ENST00000428243 662 ntBASIC23.73■■□□□ 1.39
CPS1P31327 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC23.73■■□□□ 1.39
CPS1P31327 DOC2GP-202ENST00000514950 1163 ntBASIC23.73■■□□□ 1.39
CPS1P31327 AC104989.1-201ENST00000519711 778 ntBASIC23.73■■□□□ 1.39
CPS1P31327 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPS1P31327 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms