Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNGA1P29973 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
CNGA1P29973 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNGA1P29973 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CNGA1P29973 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.41■□□□□ 0.7
CNGA1P29973 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.41■□□□□ 0.7
CNGA1P29973 AC005034.1-201ENST00000426657 489 ntBASIC19.41■□□□□ 0.7
CNGA1P29973 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.41■□□□□ 0.7
CNGA1P29973 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.41■□□□□ 0.7
CNGA1P29973 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNGA1P29973 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.41■□□□□ 0.7
CNGA1P29973 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNGA1P29973 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.41■□□□□ 0.7
CNGA1P29973 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.41■□□□□ 0.7
CNGA1P29973 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNGA1P29973 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.41■□□□□ 0.7
CNGA1P29973 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CNGA1P29973 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.4■□□□□ 0.7
CNGA1P29973 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNGA1P29973 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CNGA1P29973 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
CNGA1P29973 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 CNN2P2-201ENST00000443536 909 ntBASIC19.4■□□□□ 0.7
CNGA1P29973 CNN2P3-201ENST00000450201 906 ntBASIC19.4■□□□□ 0.7
CNGA1P29973 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.4■□□□□ 0.7
CNGA1P29973 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.4■□□□□ 0.7
CNGA1P29973 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.4■□□□□ 0.7
CNGA1P29973 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 AL136317.3-201ENST00000618497 906 ntBASIC19.4■□□□□ 0.7
CNGA1P29973 AF228730.6-201ENST00000641497 218 ntBASIC19.4■□□□□ 0.7
CNGA1P29973 AC084121.3-201ENST00000641716 218 ntBASIC19.4■□□□□ 0.7
CNGA1P29973 AC105233.6-201ENST00000642093 218 ntBASIC19.4■□□□□ 0.7
CNGA1P29973 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.4■□□□□ 0.7
CNGA1P29973 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.4■□□□□ 0.7
CNGA1P29973 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNGA1P29973 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CNGA1P29973 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNGA1P29973 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CNGA1P29973 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNGA1P29973 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNGA1P29973 REXO1L11P-201ENST00000620964 1927 ntBASIC19.39■□□□□ 0.7
CNGA1P29973 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNGA1P29973 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CNGA1P29973 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 AC015922.1-201ENST00000421102 1152 ntBASIC19.39■□□□□ 0.69
CNGA1P29973 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.39■□□□□ 0.69
CNGA1P29973 KRT18P32-201ENST00000424695 1287 ntBASIC19.39■□□□□ 0.69
CNGA1P29973 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.39■□□□□ 0.69
CNGA1P29973 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.39■□□□□ 0.69
CNGA1P29973 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.39■□□□□ 0.69
CNGA1P29973 AL035252.4-201ENST00000624174 288 ntBASIC19.39■□□□□ 0.69
CNGA1P29973 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.39■□□□□ 0.69
CNGA1P29973 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms