Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CXCL3P19876 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CXCL3P19876 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCL3P19876 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 KRT17P3-201ENST00000420566 1262 ntBASIC14.36□□□□□ -0.11
CXCL3P19876 AL355355.2-201ENST00000442321 338 ntBASIC14.36□□□□□ -0.11
CXCL3P19876 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.36□□□□□ -0.11
CXCL3P19876 RPS2P4-201ENST00000476944 856 ntBASIC14.36□□□□□ -0.11
CXCL3P19876 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.36□□□□□ -0.11
CXCL3P19876 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.36□□□□□ -0.11
CXCL3P19876 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCL3P19876 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.36□□□□□ -0.11
CXCL3P19876 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CXCL3P19876 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCL3P19876 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL3P19876 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CXCL3P19876 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 AC026748.1-201ENST00000624349 3251 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 AP005117.1-202ENST00000581724 1908 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 HLA-L-209ENST00000420110 1011 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCL3P19876 AC104390.1-201ENST00000555663 520 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 MTDHP1-201ENST00000605323 784 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 AC069544.1-201ENST00000609399 999 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 AC023157.3-201ENST00000619086 2088 ntBASIC14.35□□□□□ -0.11
CXCL3P19876 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL3P19876 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL3P19876 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL3P19876 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms