Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NFKB1P19838 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.38■□□□□ 0.37
NFKB1P19838 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NFKB1P19838 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NFKB1P19838 AC078925.2-201ENST00000624013 1973 ntBASIC17.38■□□□□ 0.37
NFKB1P19838 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.38■□□□□ 0.37
NFKB1P19838 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NFKB1P19838 PCDHB17P-201ENST00000539533 2393 ntBASIC17.38■□□□□ 0.37
NFKB1P19838 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.38■□□□□ 0.37
NFKB1P19838 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NFKB1P19838 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.37■□□□□ 0.37
NFKB1P19838 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.37■□□□□ 0.37
NFKB1P19838 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.37■□□□□ 0.37
NFKB1P19838 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.37■□□□□ 0.37
NFKB1P19838 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.37■□□□□ 0.37
NFKB1P19838 AC004706.3-202ENST00000621574 984 ntBASIC17.37■□□□□ 0.37
NFKB1P19838 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.37■□□□□ 0.37
NFKB1P19838 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.37■□□□□ 0.37
NFKB1P19838 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NFKB1P19838 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.37■□□□□ 0.37
NFKB1P19838 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
NFKB1P19838 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.36■□□□□ 0.37
NFKB1P19838 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.36■□□□□ 0.37
NFKB1P19838 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.36■□□□□ 0.37
NFKB1P19838 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.36■□□□□ 0.37
NFKB1P19838 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.36■□□□□ 0.37
NFKB1P19838 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.36■□□□□ 0.37
NFKB1P19838 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NFKB1P19838 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
NFKB1P19838 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
NFKB1P19838 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.36■□□□□ 0.37
NFKB1P19838 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.36■□□□□ 0.37
NFKB1P19838 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NFKB1P19838 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NFKB1P19838 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NFKB1P19838 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
NFKB1P19838 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.35■□□□□ 0.37
NFKB1P19838 ELK2BP-201ENST00000415014 1224 ntBASIC17.35■□□□□ 0.37
NFKB1P19838 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 TERC-201ENST00000602385 541 ntBASIC17.35■□□□□ 0.37
NFKB1P19838 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms