Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 PKD1P1-201ENST00000458669 6805 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SPDYE11-202ENST00000450699 704 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 AC023141.5-201ENST00000458585 616 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 KRT8P48-201ENST00000515599 1220 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SPDYE9P-201ENST00000570642 692 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SPDYE10P-202ENST00000612005 668 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SPDYE8P-202ENST00000612377 668 ntBASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-38-2P0DP08 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 AL353732.1-201ENST00000569618 1459 ntBASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-38-2P0DP08 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 FZD10-202ENST00000539839 3282 ntBASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 AC067852.2-201ENST00000590513 2313 ntBASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 TFAMP1-201ENST00000412727 736 ntBASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 AL627223.1-201ENST00000416693 442 ntBASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 AC109322.1-201ENST00000524499 1264 ntBASIC13.72□□□□□ -0.21
IGHV4-38-2P0DP08 FAM86C2P-203ENST00000528684 1004 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms