Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 AC087163.2-201ENST00000457299 853 ntBASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 AC027796.2-201ENST00000575326 344 ntBASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AL513480.1-201ENST00000451731 511 ntBASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AP000344.2-201ENST00000512987 629 ntBASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 ACTL9-202ENST00000612068 1252 ntBASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AC091812.2-201ENST00000619081 385 ntBASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AC006116.8-202ENST00000587620 1550 ntBASIC16.09■□□□□ 0.17
RAB40ALP0C0E4 AC009053.2-201ENST00000563701 2365 ntBASIC16.08■□□□□ 0.17
RAB40ALP0C0E4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RAB40ALP0C0E4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40ALP0C0E4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40ALP0C0E4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 METTL21AP1-201ENST00000438852 635 ntBASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RAB40ALP0C0E4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms