Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
FREM3P0C091 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FREM3P0C091 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 GPALPP1-207ENST00000611650 899 ntBASIC15.49■□□□□ 0.07
FREM3P0C091 AC010507.1-201ENST00000633895 436 ntBASIC15.49■□□□□ 0.07
FREM3P0C091 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.48■□□□□ 0.07
FREM3P0C091 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.48■□□□□ 0.07
FREM3P0C091 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
FREM3P0C091 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.48■□□□□ 0.07
FREM3P0C091 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.48■□□□□ 0.07
FREM3P0C091 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
FREM3P0C091 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.48■□□□□ 0.07
FREM3P0C091 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.48■□□□□ 0.07
FREM3P0C091 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.48■□□□□ 0.07
FREM3P0C091 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.48■□□□□ 0.07
FREM3P0C091 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.48■□□□□ 0.07
FREM3P0C091 AC007064.4-201ENST00000637740 555 ntBASIC15.48■□□□□ 0.07
FREM3P0C091 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.48■□□□□ 0.07
FREM3P0C091 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
FREM3P0C091 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
FREM3P0C091 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
FREM3P0C091 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FREM3P0C091 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.47■□□□□ 0.07
FREM3P0C091 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.47■□□□□ 0.07
FREM3P0C091 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 IGHV3-65-201ENST00000523210 341 ntBASIC15.47■□□□□ 0.07
FREM3P0C091 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.47■□□□□ 0.07
FREM3P0C091 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 AC068137.2-201ENST00000605408 478 ntBASIC15.47■□□□□ 0.07
FREM3P0C091 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.47■□□□□ 0.07
FREM3P0C091 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 AC016396.2-201ENST00000562575 1417 ntBASIC15.47■□□□□ 0.07
FREM3P0C091 FRMD8P1-201ENST00000440433 1524 ntBASIC15.47■□□□□ 0.07
FREM3P0C091 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.47■□□□□ 0.07
FREM3P0C091 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.47■□□□□ 0.07
FREM3P0C091 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.47■□□□□ 0.07
FREM3P0C091 VN2R19P-201ENST00000442399 1052 ntBASIC15.47■□□□□ 0.07
FREM3P0C091 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
FREM3P0C091 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.47■□□□□ 0.07
FREM3P0C091 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.47■□□□□ 0.07
FREM3P0C091 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FREM3P0C091 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FREM3P0C091 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
FREM3P0C091 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FREM3P0C091 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
FREM3P0C091 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FREM3P0C091 AC116353.5-201ENST00000638148 1699 ntBASIC15.46■□□□□ 0.07
FREM3P0C091 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FREM3P0C091 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FREM3P0C091 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
FREM3P0C091 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms