Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.87■□□□□ 0.29
CAPN1P07384 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN1P07384 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CAPN1P07384 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.86■□□□□ 0.29
CAPN1P07384 AC018712.1-201ENST00000455767 687 ntBASIC16.86■□□□□ 0.29
CAPN1P07384 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.86■□□□□ 0.29
CAPN1P07384 AP001005.1-201ENST00000571755 1248 ntBASIC16.86■□□□□ 0.29
CAPN1P07384 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN1P07384 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN1P07384 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CAPN1P07384 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CAPN1P07384 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
CAPN1P07384 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN1P07384 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CAPN1P07384 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 AC124067.4-201ENST00000519691 2379 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 FAM220CP-201ENST00000395253 831 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 AL031284.1-201ENST00000419297 478 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 AC103564.2-201ENST00000432853 1299 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN1P07384 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN1P07384 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN1P07384 MTDHP3-201ENST00000594186 672 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 AC092053.1-201ENST00000605787 1936 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 AL356309.3-201ENST00000624132 1934 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN1P07384 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.85■□□□□ 0.29
CAPN1P07384 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CAPN1P07384 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CAPN1P07384 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN1P07384 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CAPN1P07384 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CAPN1P07384 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CAPN1P07384 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms