Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHGBP05060 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHGBP05060 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.44■□□□□ 0.86
CHGBP05060 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CHGBP05060 AL591424.1-201ENST00000442569 1213 ntBASIC20.44■□□□□ 0.86
CHGBP05060 RNA5SP416-201ENST00000516838 111 ntBASIC20.44■□□□□ 0.86
CHGBP05060 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.44■□□□□ 0.86
CHGBP05060 AC096734.2-201ENST00000562054 433 ntBASIC20.44■□□□□ 0.86
CHGBP05060 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.44■□□□□ 0.86
CHGBP05060 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.44■□□□□ 0.86
CHGBP05060 AC023511.2-201ENST00000618803 211 ntBASIC20.44■□□□□ 0.86
CHGBP05060 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 BCAR1-209ENST00000546196 1340 ntBASIC20.44■□□□□ 0.86
CHGBP05060 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.44■□□□□ 0.86
CHGBP05060 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHGBP05060 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.44■□□□□ 0.86
CHGBP05060 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CHGBP05060 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.43■□□□□ 0.86
CHGBP05060 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.43■□□□□ 0.86
CHGBP05060 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
CHGBP05060 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHGBP05060 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.43■□□□□ 0.86
CHGBP05060 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CHGBP05060 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.43■□□□□ 0.86
CHGBP05060 AC124947.2-201ENST00000547118 1133 ntBASIC20.43■□□□□ 0.86
CHGBP05060 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.43■□□□□ 0.86
CHGBP05060 KRT19P2-202ENST00000557173 1012 ntBASIC20.43■□□□□ 0.86
CHGBP05060 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.43■□□□□ 0.86
CHGBP05060 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.43■□□□□ 0.86
CHGBP05060 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHGBP05060 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CHGBP05060 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 AL671710.1-201ENST00000610245 2349 ntBASIC20.43■□□□□ 0.86
CHGBP05060 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHGBP05060 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
CHGBP05060 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHGBP05060 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHGBP05060 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHGBP05060 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.42■□□□□ 0.86
CHGBP05060 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.42■□□□□ 0.86
CHGBP05060 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.42■□□□□ 0.86
CHGBP05060 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.42■□□□□ 0.86
CHGBP05060 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHGBP05060 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.42■□□□□ 0.86
CHGBP05060 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.42■□□□□ 0.86
CHGBP05060 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CHGBP05060 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.42■□□□□ 0.86
CHGBP05060 AC078925.2-201ENST00000624013 1973 ntBASIC20.42■□□□□ 0.86
CHGBP05060 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHGBP05060 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.42■□□□□ 0.86
CHGBP05060 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.42■□□□□ 0.86
CHGBP05060 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.42■□□□□ 0.86
CHGBP05060 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHGBP05060 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms