Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.02■□□□□ 0.32
CAPNS1P04632 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CAPNS1P04632 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.02■□□□□ 0.32
CAPNS1P04632 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPNS1P04632 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 CICP6-201ENST00000457191 2729 ntBASIC17.02■□□□□ 0.32
CAPNS1P04632 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CAPNS1P04632 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPNS1P04632 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPNS1P04632 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPNS1P04632 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPNS1P04632 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.02■□□□□ 0.32
CAPNS1P04632 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.02■□□□□ 0.32
CAPNS1P04632 AC108751.1-201ENST00000490852 363 ntBASIC17.02■□□□□ 0.32
CAPNS1P04632 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPNS1P04632 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.02■□□□□ 0.32
CAPNS1P04632 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPNS1P04632 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPNS1P04632 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPNS1P04632 KRT8P50-201ENST00000562022 1438 ntBASIC17.02■□□□□ 0.31
CAPNS1P04632 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CAPNS1P04632 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPNS1P04632 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CAPNS1P04632 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPNS1P04632 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPNS1P04632 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
CAPNS1P04632 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPNS1P04632 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPNS1P04632 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 MTCL1P1-201ENST00000446207 792 ntBASIC17.01■□□□□ 0.31
CAPNS1P04632 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPNS1P04632 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPNS1P04632 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPNS1P04632 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPNS1P04632 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
CAPNS1P04632 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPNS1P04632 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPNS1P04632 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CAPNS1P04632 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CAPNS1P04632 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CAPNS1P04632 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17■□□□□ 0.31
CAPNS1P04632 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 CD82-202ENST00000342935 967 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
CAPNS1P04632 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17■□□□□ 0.31
CAPNS1P04632 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17■□□□□ 0.31
CAPNS1P04632 AC092474.2-201ENST00000424288 719 ntBASIC17■□□□□ 0.31
CAPNS1P04632 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17■□□□□ 0.31
CAPNS1P04632 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17■□□□□ 0.31
CAPNS1P04632 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17■□□□□ 0.31
CAPNS1P04632 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17■□□□□ 0.31
CAPNS1P04632 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 AF228730.6-201ENST00000641497 218 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms