Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 AC002310.6-201ENST00000624451 1377 ntBASIC18.35■□□□□ 0.53
HLA-DRAP01903 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 AC108073.2-201ENST00000464002 357 ntBASIC18.35■□□□□ 0.53
HLA-DRAP01903 SLC25A6P2-201ENST00000497974 877 ntBASIC18.35■□□□□ 0.53
HLA-DRAP01903 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 GGTLC5P-201ENST00000617623 998 ntBASIC18.35■□□□□ 0.53
HLA-DRAP01903 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRAP01903 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HLA-DRAP01903 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 IGHV3-22-201ENST00000520721 359 ntBASIC18.34■□□□□ 0.53
HLA-DRAP01903 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.34■□□□□ 0.53
HLA-DRAP01903 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DRAP01903 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRAP01903 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DRAP01903 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRAP01903 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DRAP01903 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRAP01903 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRAP01903 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 UNC93B6-202ENST00000528242 690 ntBASIC18.33■□□□□ 0.52
HLA-DRAP01903 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 PCDHB17P-201ENST00000539533 2393 ntBASIC18.33■□□□□ 0.52
HLA-DRAP01903 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRAP01903 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DRAP01903 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DRAP01903 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DRAP01903 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 TUBB8P12-201ENST00000308911 1335 ntBASIC18.32■□□□□ 0.52
HLA-DRAP01903 TUBB7P-202ENST00000428444 1305 ntBASIC18.32■□□□□ 0.52
HLA-DRAP01903 TUBB8P7-204ENST00000567960 1332 ntBASIC18.32■□□□□ 0.52
HLA-DRAP01903 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DRAP01903 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRAP01903 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms