Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.02□□□□□ -0.16
CLN5O75503 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CLN5O75503 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.02□□□□□ -0.16
CLN5O75503 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.02□□□□□ -0.16
CLN5O75503 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN5O75503 LINC00167-201ENST00000530583 1419 ntBASIC14.02□□□□□ -0.16
CLN5O75503 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 AC113404.2-201ENST00000507884 177 ntBASIC14.02□□□□□ -0.17
CLN5O75503 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.02□□□□□ -0.17
CLN5O75503 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 AC116407.2-201ENST00000613639 860 ntBASIC14.02□□□□□ -0.17
CLN5O75503 AC141257.4-201ENST00000634557 245 ntBASIC14.02□□□□□ -0.17
CLN5O75503 AC136944.6-201ENST00000634818 245 ntBASIC14.02□□□□□ -0.17
CLN5O75503 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CLN5O75503 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CLN5O75503 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.02□□□□□ -0.17
CLN5O75503 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.02□□□□□ -0.17
CLN5O75503 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN5O75503 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN5O75503 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLN5O75503 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN5O75503 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.01□□□□□ -0.17
CLN5O75503 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.01□□□□□ -0.17
CLN5O75503 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.01□□□□□ -0.17
CLN5O75503 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CLN5O75503 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN5O75503 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN5O75503 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 AC144831.1-201ENST00000573312 2656 ntBASIC14.01□□□□□ -0.17
CLN5O75503 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CLN5O75503 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN5O75503 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN5O75503 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLN5O75503 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLN5O75503 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLN5O75503 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14□□□□□ -0.17
CLN5O75503 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14□□□□□ -0.17
CLN5O75503 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CLN5O75503 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN5O75503 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms