Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 AC114501.2-201ENST00000439631 535 ntBASIC7.51□□□□□ -1.21
USH2AO75445 MTND6P24-201ENST00000440466 518 ntBASIC7.51□□□□□ -1.21
USH2AO75445 AC006033.1-201ENST00000440505 426 ntBASIC7.51□□□□□ -1.21
USH2AO75445 AL589987.1-201ENST00000453380 819 ntBASIC7.51□□□□□ -1.21
USH2AO75445 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 PTK2-225ENST00000520892 571 ntTSL 4 BASIC7.51□□□□□ -1.21
USH2AO75445 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 AC106872.11-201ENST00000605838 421 ntBASIC7.51□□□□□ -1.21
USH2AO75445 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 AC138627.1-207ENST00000641560 1006 ntBASIC7.51□□□□□ -1.21
USH2AO75445 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC7.51□□□□□ -1.21
USH2AO75445 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC7.5□□□□□ -1.21
USH2AO75445 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 ACTG1P4-201ENST00000425123 1122 ntBASIC7.5□□□□□ -1.21
USH2AO75445 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC7.5□□□□□ -1.21
USH2AO75445 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 MIR5189-201ENST00000577370 114 ntBASIC7.5□□□□□ -1.21
USH2AO75445 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 AC093010.1-201ENST00000473625 1624 ntBASIC7.5□□□□□ -1.21
USH2AO75445 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC7.5□□□□□ -1.21
USH2AO75445 AC011495.1-201ENST00000498085 584 ntBASIC7.5□□□□□ -1.21
USH2AO75445 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
USH2AO75445 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 USP39-202ENST00000409025 1946 ntTSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
USH2AO75445 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 REEP1-202ENST00000453231 940 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms