Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF13O43567 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF13O43567 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF13O43567 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RNF13O43567 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF13O43567 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF13O43567 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF13O43567 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF13O43567 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF13O43567 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF13O43567 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF13O43567 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF13O43567 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF13O43567 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF13O43567 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 AC003669.1-201ENST00000334569 611 ntBASIC15.6■□□□□ 0.09
RNF13O43567 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RNF13O43567 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RNF13O43567 RCN1P2-201ENST00000398357 915 ntBASIC15.6■□□□□ 0.09
RNF13O43567 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.6■□□□□ 0.09
RNF13O43567 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 AC012615.1-201ENST00000565797 1299 ntBASIC15.6■□□□□ 0.09
RNF13O43567 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF13O43567 NPAP1P7-201ENST00000613027 823 ntBASIC15.6■□□□□ 0.09
RNF13O43567 AC073592.5-201ENST00000624854 528 ntBASIC15.6■□□□□ 0.09
RNF13O43567 AC009336.1-201ENST00000608941 1553 ntBASIC15.6■□□□□ 0.09
RNF13O43567 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF13O43567 INTS4P1-201ENST00000438455 1935 ntBASIC15.6■□□□□ 0.09
RNF13O43567 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF13O43567 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF13O43567 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF13O43567 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF13O43567 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF13O43567 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF13O43567 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RNF13O43567 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RNF13O43567 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 CICP6-201ENST00000457191 2729 ntBASIC15.59■□□□□ 0.09
RNF13O43567 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF13O43567 POM121L3P-201ENST00000419331 1163 ntBASIC15.59■□□□□ 0.09
RNF13O43567 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.59■□□□□ 0.09
RNF13O43567 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 ATP5G2P1-201ENST00000433580 426 ntBASIC15.59■□□□□ 0.09
RNF13O43567 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 AC099336.1-202ENST00000602961 463 ntBASIC15.59■□□□□ 0.09
RNF13O43567 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 AC114341.1-201ENST00000618070 349 ntBASIC15.59■□□□□ 0.09
RNF13O43567 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 AD001527.2-201ENST00000622994 785 ntBASIC15.59■□□□□ 0.09
RNF13O43567 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 AC008894.3-201ENST00000624324 3103 ntBASIC15.59■□□□□ 0.09
RNF13O43567 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF13O43567 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF13O43567 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RNF13O43567 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms