Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
FOXN1O15353 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXN1O15353 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
FOXN1O15353 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXN1O15353 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
FOXN1O15353 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXN1O15353 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
FOXN1O15353 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 AL020989.1-201ENST00000422979 469 ntBASIC20.35■□□□□ 0.85
FOXN1O15353 GPS2P2-201ENST00000430745 888 ntBASIC20.35■□□□□ 0.85
FOXN1O15353 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.35■□□□□ 0.85
FOXN1O15353 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 AL592309.1-201ENST00000443127 649 ntBASIC20.35■□□□□ 0.85
FOXN1O15353 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 AC068587.10-201ENST00000641210 219 ntBASIC20.35■□□□□ 0.85
FOXN1O15353 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.35■□□□□ 0.85
FOXN1O15353 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.35■□□□□ 0.85
FOXN1O15353 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXN1O15353 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXN1O15353 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FOXN1O15353 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
FOXN1O15353 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
FOXN1O15353 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.34■□□□□ 0.85
FOXN1O15353 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
FOXN1O15353 AC097493.3-201ENST00000509725 367 ntBASIC20.34■□□□□ 0.85
FOXN1O15353 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXN1O15353 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
FOXN1O15353 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN1O15353 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
FOXN1O15353 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
FOXN1O15353 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
FOXN1O15353 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXN1O15353 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN1O15353 SPDYE11-202ENST00000450699 704 ntBASIC20.33■□□□□ 0.85
FOXN1O15353 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.33■□□□□ 0.85
FOXN1O15353 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXN1O15353 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXN1O15353 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXN1O15353 SPDYE9P-201ENST00000570642 692 ntBASIC20.33■□□□□ 0.85
FOXN1O15353 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.33■□□□□ 0.85
FOXN1O15353 MIR4525-201ENST00000580000 75 ntBASIC20.33■□□□□ 0.85
FOXN1O15353 SPDYE10P-202ENST00000612005 668 ntBASIC20.33■□□□□ 0.85
FOXN1O15353 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXN1O15353 SPDYE8P-202ENST00000612377 668 ntBASIC20.33■□□□□ 0.85
FOXN1O15353 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXN1O15353 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXN1O15353 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXN1O15353 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXN1O15353 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
FOXN1O15353 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
FOXN1O15353 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FOXN1O15353 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXN1O15353 AC139713.2-201ENST00000641328 2723 ntBASIC20.33■□□□□ 0.84
FOXN1O15353 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 KRT18P55-202ENST00000578578 1546 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms