Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 FZD10-202ENST00000539839 3282 ntBASIC17.06■□□□□ 0.32
MID1O15344 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MID1O15344 AC093525.9-201ENST00000624961 1746 ntBASIC17.06■□□□□ 0.32
MID1O15344 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MID1O15344 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MID1O15344 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.06■□□□□ 0.32
MID1O15344 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.06■□□□□ 0.32
MID1O15344 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.06■□□□□ 0.32
MID1O15344 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.05■□□□□ 0.32
MID1O15344 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.05■□□□□ 0.32
MID1O15344 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
MID1O15344 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 SLC25A1P3-201ENST00000395415 828 ntBASIC17.05■□□□□ 0.32
MID1O15344 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.05■□□□□ 0.32
MID1O15344 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 AC022145.2-201ENST00000598203 171 ntBASIC17.05■□□□□ 0.32
MID1O15344 AC004835.2-201ENST00000603762 682 ntBASIC17.05■□□□□ 0.32
MID1O15344 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.05■□□□□ 0.32
MID1O15344 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MID1O15344 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
MID1O15344 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.05■□□□□ 0.32
MID1O15344 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.05■□□□□ 0.32
MID1O15344 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
MID1O15344 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MID1O15344 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.04■□□□□ 0.32
MID1O15344 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
MID1O15344 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MID1O15344 AL121761.2-201ENST00000598007 1648 ntBASIC17.04■□□□□ 0.32
MID1O15344 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.04■□□□□ 0.32
MID1O15344 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MID1O15344 AL138688.1-201ENST00000624851 1594 ntBASIC17.04■□□□□ 0.32
MID1O15344 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.04■□□□□ 0.32
MID1O15344 ADH5P3-201ENST00000433842 1137 ntBASIC17.04■□□□□ 0.32
MID1O15344 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.04■□□□□ 0.32
MID1O15344 AC005412.3-201ENST00000580309 715 ntBASIC17.04■□□□□ 0.32
MID1O15344 AC099522.2-201ENST00000607001 744 ntBASIC17.04■□□□□ 0.32
MID1O15344 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.04■□□□□ 0.32
MID1O15344 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.04■□□□□ 0.32
MID1O15344 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MID1O15344 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MID1O15344 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MID1O15344 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
MID1O15344 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.03■□□□□ 0.32
MID1O15344 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MID1O15344 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.03■□□□□ 0.32
MID1O15344 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
MID1O15344 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.03■□□□□ 0.32
MID1O15344 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MID1O15344 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms